'Spectrum; a mass spectrum for de novo sequencing. '

https://github.com/savastakan/dnmso#Spectrum
Class 'Spectrum; a mass spectrum for de novo sequencing. '

type

Class [owl:Class]

comment

A Spectrum needs to specify a few identifying information (precursorIntensity, precursorMZ, scanId, and spectrumId) so that it can be retrieved from a link and in order to be useful in de novo sequencing. A Spectrum can either provide the SpectrumData as a CSV or a Link to another object e.g., an mzML file. CSV enables the DNMSO file to be self-contained. Linking to mzML files is encouraged.

label

Spectrum; a mass spectrum for de novo sequencing.

subClassOf

Thing

scanId; the scan number of the spectrum. exactly 1

precursorMZ; the m/z of the precursor peak. exactly 1

Class [owl:Class]

precursorIntensity; ihe intensity of the precursor peak. exactly 1

csvPeakList; spectrum in CSV format. max 1

spectrumId; the spectrum ID (unique identifier per DNMSO instance). exactly 1

References
as domain (spectrumId; the spectrum ID (unique identifier per DNMSO instance). , scanId; the scan number of the spectrum. , precursorMZ; the m/z of the precursor peak. , precursorIntensity; ihe intensity of the precursor peak. , csvPeakList; spectrum in CSV format.) as range (hasSpectrum; the relationship between Spectra and Spectrum. , hasSources; the relationship between Prediction and Source. , hasPeakLinkSpectrum; link to Spectrum containing the peak. )

References

as domain (spectrumId; the spectrum ID (unique identifier per DNMSO instance). , scanId; the scan number of the spectrum. , precursorMZ; the m/z of the precursor peak. , precursorIntensity; ihe intensity of the precursor peak. , csvPeakList; spectrum in CSV format.)
as range (hasSpectrum; the relationship between Spectra and Spectrum. , hasSources; the relationship between Prediction and Source. , hasPeakLinkSpectrum; link to Spectrum containing the peak. )

Generated with TopBraid Composer by TopQuadrant, Inc.

https://github.com/savastakan/dnmso#Spectrum Class 'Spectrum; a mass spectrum for de novo sequencing. '

https://github.com/savastakan/dnmso#Spectrum
Class 'Spectrum; a mass spectrum for de novo sequencing. '